Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDH7O60245 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDH7O60245 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH7O60245 AC107918.2-201ENST00000530817 355 ntBASIC16.01■□□□□ 0.15
PCDH7O60245 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 AC105339.3-201ENST00000560043 636 ntBASIC16.01■□□□□ 0.15
PCDH7O60245 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.01■□□□□ 0.15
PCDH7O60245 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 MIR4492-201ENST00000581627 80 ntBASIC16.01■□□□□ 0.15
PCDH7O60245 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 AL356488.2-201ENST00000602755 427 ntBASIC16.01■□□□□ 0.15
PCDH7O60245 AC008667.4-201ENST00000607370 168 ntBASIC16.01■□□□□ 0.15
PCDH7O60245 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH7O60245 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 AC131009.4-201ENST00000624048 1740 ntBASIC16.01■□□□□ 0.15
PCDH7O60245 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH7O60245 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
PCDH7O60245 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDH7O60245 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16■□□□□ 0.15
PCDH7O60245 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 FER1L4-210ENST00000615531 5998 ntBASIC16■□□□□ 0.15
PCDH7O60245 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16■□□□□ 0.15
PCDH7O60245 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PCDH7O60245 AC092364.2-201ENST00000596710 2692 ntBASIC16■□□□□ 0.15
PCDH7O60245 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
PCDH7O60245 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16■□□□□ 0.15
PCDH7O60245 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16■□□□□ 0.15
PCDH7O60245 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16■□□□□ 0.15
PCDH7O60245 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16■□□□□ 0.15
PCDH7O60245 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16■□□□□ 0.15
PCDH7O60245 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16■□□□□ 0.15
PCDH7O60245 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDH7O60245 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16■□□□□ 0.15
PCDH7O60245 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16■□□□□ 0.15
PCDH7O60245 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16■□□□□ 0.15
PCDH7O60245 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16■□□□□ 0.15
PCDH7O60245 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16■□□□□ 0.15
PCDH7O60245 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16■□□□□ 0.15
PCDH7O60245 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16■□□□□ 0.15
PCDH7O60245 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16■□□□□ 0.15
PCDH7O60245 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16■□□□□ 0.15
PCDH7O60245 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
PCDH7O60245 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDH7O60245 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDH7O60245 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH7O60245 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PCDH7O60245 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH7O60245 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
PCDH7O60245 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH7O60245 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
PCDH7O60245 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PCDH7O60245 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH7O60245 AL353732.1-201ENST00000569618 1459 ntBASIC15.99■□□□□ 0.15
PCDH7O60245 AP002414.3-201ENST00000589352 1468 ntBASIC15.99■□□□□ 0.15
PCDH7O60245 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 AL671710.1-201ENST00000610245 2349 ntBASIC15.99■□□□□ 0.15
PCDH7O60245 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH7O60245 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 RPS2P28-201ENST00000314255 741 ntBASIC15.99■□□□□ 0.15
PCDH7O60245 AC004870.1-201ENST00000315132 882 ntBASIC15.99■□□□□ 0.15
PCDH7O60245 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDH7O60245 PMS2P1-201ENST00000431037 1228 ntBASIC15.99■□□□□ 0.15
PCDH7O60245 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms