Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.72□□□□□ -0.21
SSSCA1O60232 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
SSSCA1O60232 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SSSCA1O60232 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.72□□□□□ -0.21
SSSCA1O60232 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.72□□□□□ -0.21
SSSCA1O60232 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.72□□□□□ -0.21
SSSCA1O60232 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SSSCA1O60232 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SSSCA1O60232 SNORA78-201ENST00000459373 127 ntBASIC13.72□□□□□ -0.21
SSSCA1O60232 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.72□□□□□ -0.21
SSSCA1O60232 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.72□□□□□ -0.21
SSSCA1O60232 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.72□□□□□ -0.21
SSSCA1O60232 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.72□□□□□ -0.21
SSSCA1O60232 AC073912.3-201ENST00000624414 853 ntBASIC13.72□□□□□ -0.21
SSSCA1O60232 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SSSCA1O60232 AC010491.1-201ENST00000563101 2797 ntBASIC13.72□□□□□ -0.21
SSSCA1O60232 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.72□□□□□ -0.21
SSSCA1O60232 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SSSCA1O60232 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.72□□□□□ -0.21
SSSCA1O60232 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSSCA1O60232 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.72□□□□□ -0.21
SSSCA1O60232 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
SSSCA1O60232 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.71□□□□□ -0.21
SSSCA1O60232 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SSSCA1O60232 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
SSSCA1O60232 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.71□□□□□ -0.21
SSSCA1O60232 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SSSCA1O60232 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.71□□□□□ -0.21
SSSCA1O60232 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SSSCA1O60232 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.71□□□□□ -0.21
SSSCA1O60232 AL359075.1-203ENST00000462729 1002 ntBASIC13.71□□□□□ -0.21
SSSCA1O60232 AC092597.1-201ENST00000487352 616 ntBASIC13.71□□□□□ -0.21
SSSCA1O60232 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.71□□□□□ -0.21
SSSCA1O60232 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SSSCA1O60232 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.71□□□□□ -0.21
SSSCA1O60232 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.71□□□□□ -0.21
SSSCA1O60232 AC005332.3-201ENST00000589904 676 ntBASIC13.71□□□□□ -0.21
SSSCA1O60232 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.71□□□□□ -0.21
SSSCA1O60232 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.71□□□□□ -0.21
SSSCA1O60232 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.71□□□□□ -0.21
SSSCA1O60232 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.71□□□□□ -0.21
SSSCA1O60232 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSSCA1O60232 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSSCA1O60232 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSSCA1O60232 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSSCA1O60232 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSSCA1O60232 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.71□□□□□ -0.22
SSSCA1O60232 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.71□□□□□ -0.22
SSSCA1O60232 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSSCA1O60232 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SSSCA1O60232 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SSSCA1O60232 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
SSSCA1O60232 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
SSSCA1O60232 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.7□□□□□ -0.22
SSSCA1O60232 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms