Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.3■■□□□ 1
KCNQ3O43525 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.3■■□□□ 1
KCNQ3O43525 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.3■■□□□ 1
KCNQ3O43525 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.3■■□□□ 1
KCNQ3O43525 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.3■■□□□ 1
KCNQ3O43525 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC21.3■■□□□ 1
KCNQ3O43525 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC21.3■■□□□ 1
KCNQ3O43525 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 RPS15-212ENST00000593052 629 ntTSL 2 BASIC21.3■■□□□ 1
KCNQ3O43525 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC21.3■■□□□ 1
KCNQ3O43525 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
KCNQ3O43525 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
KCNQ3O43525 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.29■■□□□ 1
KCNQ3O43525 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNQ3O43525 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC21.29■■□□□ 1
KCNQ3O43525 GGT4P-201ENST00000623672 1708 ntBASIC21.29■■□□□ 1
KCNQ3O43525 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.29■■□□□ 1
KCNQ3O43525 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.29■■□□□ 1
KCNQ3O43525 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.29■■□□□ 1
KCNQ3O43525 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC21.29■■□□□ 1
KCNQ3O43525 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNQ3O43525 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNQ3O43525 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC21.29■■□□□ 1
KCNQ3O43525 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNQ3O43525 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.29■■□□□ 1
KCNQ3O43525 AC098859.1-201ENST00000502915 1238 ntBASIC21.29■■□□□ 1
KCNQ3O43525 QPRT-203ENST00000562473 579 ntTSL 3 BASIC21.29■■□□□ 1
KCNQ3O43525 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC21.29■■□□□ 1
KCNQ3O43525 AF228730.6-201ENST00000641497 218 ntBASIC21.29■■□□□ 1
KCNQ3O43525 AC084121.3-201ENST00000641716 218 ntBASIC21.29■■□□□ 1
KCNQ3O43525 AC105233.6-201ENST00000642093 218 ntBASIC21.29■■□□□ 1
KCNQ3O43525 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNQ3O43525 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNQ3O43525 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
KCNQ3O43525 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
KCNQ3O43525 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.28■■□□□ 1
KCNQ3O43525 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
KCNQ3O43525 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.28■■□□□ 1
KCNQ3O43525 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
KCNQ3O43525 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
KCNQ3O43525 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.28■■□□□ 1
KCNQ3O43525 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.28■■□□□ 1
KCNQ3O43525 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
KCNQ3O43525 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
KCNQ3O43525 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.28■■□□□ 1
KCNQ3O43525 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.28■■□□□ 1
KCNQ3O43525 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 RPL37AP1-201ENST00000412502 279 ntBASIC21.28■■□□□ 1
KCNQ3O43525 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.28■■□□□ 1
KCNQ3O43525 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.28■■□□□ 1
KCNQ3O43525 AL512638.1-201ENST00000457493 794 ntBASIC21.28■■□□□ 1
KCNQ3O43525 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.28■■□□□ 1
KCNQ3O43525 MPI-209ENST00000564003 1195 ntTSL 2 BASIC21.28■■□□□ 1
KCNQ3O43525 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.28■■□□□ 1
KCNQ3O43525 AL133215.2-201ENST00000609242 977 ntBASIC21.28■■□□□ 1
KCNQ3O43525 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.28■■□□□ 1
KCNQ3O43525 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
KCNQ3O43525 AL139011.1-202ENST00000642063 584 ntBASIC21.28■■□□□ 1
KCNQ3O43525 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC21.28■■□□□ 1
KCNQ3O43525 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.28■■□□□ 1
KCNQ3O43525 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC21.28■■□□□ 1
KCNQ3O43525 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNQ3O43525 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNQ3O43525 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNQ3O43525 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KCNQ3O43525 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC21.27■■□□□ 1
KCNQ3O43525 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.27■■□□□ 1
KCNQ3O43525 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
KCNQ3O43525 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.27■■□□□ 1
KCNQ3O43525 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNQ3O43525 AC105020.1-201ENST00000435356 2205 ntBASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms