Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.59■□□□□ 0.41
SOX1O00570 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SOX1O00570 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SOX1O00570 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SOX1O00570 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.58■□□□□ 0.41
SOX1O00570 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SOX1O00570 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SOX1O00570 AC138028.6-201ENST00000616106 1482 ntBASIC17.58■□□□□ 0.41
SOX1O00570 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SOX1O00570 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX1O00570 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX1O00570 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX1O00570 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX1O00570 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SOX1O00570 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX1O00570 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX1O00570 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.58■□□□□ 0.4
SOX1O00570 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.58■□□□□ 0.4
SOX1O00570 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.58■□□□□ 0.4
SOX1O00570 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.58■□□□□ 0.4
SOX1O00570 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.58■□□□□ 0.4
SOX1O00570 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.58■□□□□ 0.4
SOX1O00570 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.58■□□□□ 0.4
SOX1O00570 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.58■□□□□ 0.4
SOX1O00570 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SOX1O00570 CYP2A7P1-201ENST00000595391 815 ntBASIC17.58■□□□□ 0.4
SOX1O00570 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.58■□□□□ 0.4
SOX1O00570 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.58■□□□□ 0.4
SOX1O00570 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.58■□□□□ 0.4
SOX1O00570 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SOX1O00570 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SOX1O00570 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.58■□□□□ 0.4
SOX1O00570 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
SOX1O00570 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SOX1O00570 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.58■□□□□ 0.4
SOX1O00570 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX1O00570 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.58■□□□□ 0.4
SOX1O00570 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX1O00570 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SOX1O00570 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX1O00570 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SOX1O00570 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SOX1O00570 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SOX1O00570 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.57■□□□□ 0.4
SOX1O00570 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SOX1O00570 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX1O00570 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.57■□□□□ 0.4
SOX1O00570 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX1O00570 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX1O00570 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.57■□□□□ 0.4
SOX1O00570 SPDYE17-201ENST00000412399 783 ntBASIC17.57■□□□□ 0.4
SOX1O00570 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SOX1O00570 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX1O00570 IMP3P2-201ENST00000489760 475 ntBASIC17.57■□□□□ 0.4
SOX1O00570 SCARNA20.5-201ENST00000516991 142 ntBASIC17.57■□□□□ 0.4
SOX1O00570 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.57■□□□□ 0.4
SOX1O00570 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.57■□□□□ 0.4
SOX1O00570 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
SOX1O00570 AC244669.2-201ENST00000612320 853 ntBASIC17.57■□□□□ 0.4
SOX1O00570 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX1O00570 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SOX1O00570 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX1O00570 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX1O00570 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX1O00570 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.57■□□□□ 0.4
SOX1O00570 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SOX1O00570 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX1O00570 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.57■□□□□ 0.4
SOX1O00570 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SOX1O00570 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SOX1O00570 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.56■□□□□ 0.4
SOX1O00570 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SOX1O00570 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SOX1O00570 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.56■□□□□ 0.4
SOX1O00570 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.56■□□□□ 0.4
SOX1O00570 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.56■□□□□ 0.4
SOX1O00570 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
SOX1O00570 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SOX1O00570 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.56■□□□□ 0.4
SOX1O00570 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.56■□□□□ 0.4
SOX1O00570 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.56■□□□□ 0.4
SOX1O00570 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.56■□□□□ 0.4
SOX1O00570 AC068587.3-201ENST00000526613 355 ntBASIC17.56■□□□□ 0.4
SOX1O00570 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms