Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.93■□□□□ 0.46
FOXN3O00409 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXN3O00409 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
FOXN3O00409 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
FOXN3O00409 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
FOXN3O00409 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
FOXN3O00409 PRSS29P-201ENST00000440800 595 ntBASIC17.92■□□□□ 0.46
FOXN3O00409 AC108751.1-201ENST00000490852 363 ntBASIC17.92■□□□□ 0.46
FOXN3O00409 UNC93B6-202ENST00000528242 690 ntBASIC17.92■□□□□ 0.46
FOXN3O00409 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.92■□□□□ 0.46
FOXN3O00409 AP001005.1-201ENST00000571755 1248 ntBASIC17.92■□□□□ 0.46
FOXN3O00409 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.92■□□□□ 0.46
FOXN3O00409 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
FOXN3O00409 AC010654.1-201ENST00000615722 808 ntBASIC17.92■□□□□ 0.46
FOXN3O00409 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.92■□□□□ 0.46
FOXN3O00409 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.92■□□□□ 0.46
FOXN3O00409 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
FOXN3O00409 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXN3O00409 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
FOXN3O00409 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXN3O00409 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN3O00409 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN3O00409 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
FOXN3O00409 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN3O00409 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXN3O00409 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
FOXN3O00409 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXN3O00409 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN3O00409 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN3O00409 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
FOXN3O00409 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN3O00409 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXN3O00409 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN3O00409 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXN3O00409 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN3O00409 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN3O00409 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.91■□□□□ 0.46
FOXN3O00409 HCG4-201ENST00000418983 998 ntBASIC17.91■□□□□ 0.46
FOXN3O00409 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.91■□□□□ 0.46
FOXN3O00409 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.91■□□□□ 0.46
FOXN3O00409 AC009947.1-201ENST00000444350 727 ntBASIC17.91■□□□□ 0.46
FOXN3O00409 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXN3O00409 IGHV3-22-201ENST00000520721 359 ntBASIC17.91■□□□□ 0.46
FOXN3O00409 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.91■□□□□ 0.46
FOXN3O00409 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXN3O00409 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN3O00409 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.91■□□□□ 0.46
FOXN3O00409 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXN3O00409 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN3O00409 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXN3O00409 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
FOXN3O00409 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
FOXN3O00409 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN3O00409 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN3O00409 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
FOXN3O00409 AL391005.1-201ENST00000623953 2435 ntBASIC17.9■□□□□ 0.46
FOXN3O00409 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXN3O00409 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
FOXN3O00409 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXN3O00409 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXN3O00409 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 AC026691.1-201ENST00000602502 2017 ntBASIC17.9■□□□□ 0.46
FOXN3O00409 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXN3O00409 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
FOXN3O00409 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 TPM4P1-201ENST00000436100 807 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms