Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 MIR346-201ENST00000362234 95 ntBASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 SPDYE14P-201ENST00000442619 822 ntBASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 AC125807.1-201ENST00000483097 614 ntBASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 AC107890.1-201ENST00000422478 521 ntBASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 AC055876.3-201ENST00000431496 288 ntBASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 AC138649.4-201ENST00000612222 287 ntBASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 MIR6080-201ENST00000617359 66 ntBASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 AC141586.5-201ENST00000624546 2050 ntBASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TBC1D3FA6NER0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 AL390955.2-201ENST00000603032 514 ntBASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms