Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 AC241585.1-201ENST00000433527 519 ntBASIC14.61□□□□□ -0.07
MBD3L3A6NE82 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 AL512638.1-201ENST00000457493 794 ntBASIC14.61□□□□□ -0.07
MBD3L3A6NE82 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 HLA-J-202ENST00000469281 1241 ntBASIC14.61□□□□□ -0.07
MBD3L3A6NE82 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 AL035633.1-201ENST00000406139 838 ntBASIC14.6□□□□□ -0.07
MBD3L3A6NE82 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.6□□□□□ -0.07
MBD3L3A6NE82 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 GPAA1P2-202ENST00000606848 1787 ntBASIC14.6□□□□□ -0.07
MBD3L3A6NE82 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MBD3L3A6NE82 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 FAM207CP-201ENST00000443486 507 ntBASIC14.59□□□□□ -0.07
MBD3L3A6NE82 AC093724.1-201ENST00000448659 1027 ntBASIC14.59□□□□□ -0.07
MBD3L3A6NE82 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 HLA-V-204ENST00000476601 1289 ntBASIC14.59□□□□□ -0.07
MBD3L3A6NE82 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 AC027369.6-201ENST00000525520 931 ntBASIC14.59□□□□□ -0.07
MBD3L3A6NE82 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 AC138761.1-201ENST00000584393 385 ntBASIC14.59□□□□□ -0.07
MBD3L3A6NE82 SPDYE12P-201ENST00000618416 771 ntBASIC14.59□□□□□ -0.07
MBD3L3A6NE82 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms