Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 TNRC18P3-201ENST00000441896 2691 ntBASIC15.9■□□□□ 0.14
LRIT2A6NDA9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 MIR940-201ENST00000401276 94 ntBASIC15.9■□□□□ 0.14
LRIT2A6NDA9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 PMS2P4-201ENST00000412466 1052 ntBASIC15.9■□□□□ 0.14
LRIT2A6NDA9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 AP000347.1-202ENST00000435868 847 ntBASIC15.9■□□□□ 0.14
LRIT2A6NDA9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 MIR3909-201ENST00000579518 119 ntBASIC15.9■□□□□ 0.14
LRIT2A6NDA9 AC092865.6-201ENST00000642101 219 ntBASIC15.9■□□□□ 0.14
LRIT2A6NDA9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LRIT2A6NDA9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 OR6D1P-203ENST00000641209 4860 ntBASIC15.89■□□□□ 0.13
LRIT2A6NDA9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 GGT4P-201ENST00000623672 1708 ntBASIC15.89■□□□□ 0.13
LRIT2A6NDA9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 PDPK2P-202ENST00000562415 1191 ntBASIC15.89■□□□□ 0.13
LRIT2A6NDA9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 AL031055.1-201ENST00000606362 631 ntBASIC15.89■□□□□ 0.13
LRIT2A6NDA9 AL513190.1-201ENST00000621254 727 ntBASIC15.89■□□□□ 0.13
LRIT2A6NDA9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRIT2A6NDA9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms