Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 AC006277.1-201ENST00000624348 1610 ntBASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 KRT19P2-202ENST00000557173 1012 ntBASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 AC013467.2-201ENST00000605472 835 ntBASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 AL078644.1-201ENST00000609881 752 ntBASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 REXO1L3P-201ENST00000622202 1288 ntBASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPDC1A2A3K4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 PDPK2P-202ENST00000562415 1191 ntBASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 MIR4469-201ENST00000583919 79 ntBASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 AC025580.3-201ENST00000617932 1424 ntBASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPDC1A2A3K4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 AL662844.4-201ENST00000606367 2838 ntBASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 RHOQP3-201ENST00000437982 621 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms