Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 HYMAI-201ENST00000635591 3347 ntBASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 AP002414.1-201ENST00000391405 1147 ntBASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 AF186996.4-201ENST00000467186 377 ntBASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 OR7E14P-202ENST00000530490 1290 ntBASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DRB4X5D2U9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 TUBB8P12-201ENST00000308911 1335 ntBASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 TUBB7P-202ENST00000428444 1305 ntBASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 TUBB8P7-204ENST00000567960 1332 ntBASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 KRT18P67-201ENST00000432816 1264 ntBASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 FAM197Y8-203ENST00000450145 560 ntBASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 TP73-AS1-207ENST00000624167 988 ntBASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 AC243591.1-201ENST00000452967 1364 ntBASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms