Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 STARP1-201ENST00000397973 869 ntBASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 AC019129.2-201ENST00000609837 1235 ntBASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 MIR662-201ENST00000384847 95 ntBASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 AC026396.1-201ENST00000419388 421 ntBASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 AC122714.2-201ENST00000502787 707 ntBASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 AL023973.1-201ENST00000624619 620 ntBASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 AC013268.4-201ENST00000637413 2228 ntBASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 TNRC18P2-201ENST00000417666 2714 ntBASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB1Q9Y5G3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 GPR89P-201ENST00000407924 1495 ntBASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 AC073347.1-201ENST00000421633 2643 ntBASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 PCED1CP-201ENST00000419887 785 ntBASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 TSPY5P-201ENST00000426936 936 ntBASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 YBX1P2-201ENST00000489612 999 ntBASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms