Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.46■□□□□ 0.23
SATB2Q9UPW6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 FAM86GP-201ENST00000448322 971 ntBASIC16.46■□□□□ 0.23
SATB2Q9UPW6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 AC018695.7-201ENST00000624587 2492 ntBASIC16.46■□□□□ 0.23
SATB2Q9UPW6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
SATB2Q9UPW6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SATB2Q9UPW6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
SATB2Q9UPW6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 AL590787.1-201ENST00000568856 1315 ntBASIC16.45■□□□□ 0.22
SATB2Q9UPW6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 AL121761.2-201ENST00000598007 1648 ntBASIC16.45■□□□□ 0.22
SATB2Q9UPW6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 ACTG1P4-201ENST00000425123 1122 ntBASIC16.45■□□□□ 0.22
SATB2Q9UPW6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 AC112191.1-201ENST00000523689 701 ntBASIC16.45■□□□□ 0.22
SATB2Q9UPW6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 AC005498.2-205ENST00000593218 784 ntBASIC16.45■□□□□ 0.22
SATB2Q9UPW6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
SATB2Q9UPW6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 FAM185BP-201ENST00000443595 716 ntBASIC16.44■□□□□ 0.22
SATB2Q9UPW6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 PAWRP1-201ENST00000451083 565 ntBASIC16.44■□□□□ 0.22
SATB2Q9UPW6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SATB2Q9UPW6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms