Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC060834.1-201ENST00000443027 2032 ntBASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 FAM197Y3-203ENST00000618346 717 ntBASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
PPARGC1AQ9UBK2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 CICP6-201ENST00000457191 2729 ntBASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 FAM185BP-201ENST00000443595 716 ntBASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 AC027601.4-201ENST00000611259 610 ntBASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 AC092068.3-201ENST00000587894 2016 ntBASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.48■□□□□ 0.39
PPARGC1AQ9UBK2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 MIR574-201ENST00000385209 96 ntBASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 IGLL3P-201ENST00000412472 434 ntBASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 CXCL1P1-201ENST00000502804 216 ntBASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 AC064836.3-201ENST00000607928 673 ntBASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.47■□□□□ 0.39
PPARGC1AQ9UBK2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms