Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 ADH5P3-201ENST00000433842 1137 ntBASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 AC004967.1-201ENST00000453589 447 ntBASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 AC109635.5-201ENST00000533593 962 ntBASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK1Q9NYA1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 KRT8P39-201ENST00000396270 1433 ntBASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 AD000864.1-201ENST00000624076 2295 ntBASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 PMS2P4-201ENST00000412466 1052 ntBASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 AL355306.1-201ENST00000415580 579 ntBASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 AL671277.1-201ENST00000429656 993 ntBASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 ACTG1P14-201ENST00000446382 1122 ntBASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK1Q9NYA1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPHK1Q9NYA1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.1■□□□□ 0.17
SPHK1Q9NYA1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPHK1Q9NYA1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
SPHK1Q9NYA1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.1■□□□□ 0.17
SPHK1Q9NYA1 UBALD1-205ENST00000590891 2641 ntBASIC16.1■□□□□ 0.17
SPHK1Q9NYA1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPHK1Q9NYA1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPHK1Q9NYA1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPHK1Q9NYA1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms