Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 AC004706.3-202ENST00000621574 984 ntBASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 AC005052.1-201ENST00000625181 2492 ntBASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 AC008741.2-201ENST00000612792 3115 ntBASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRTM1Q9HBL6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.14■□□□□ 0.18
LRTM1Q9HBL6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRTM1Q9HBL6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.14■□□□□ 0.18
LRTM1Q9HBL6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 AC087163.2-201ENST00000457299 853 ntBASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 AC091304.2-201ENST00000564639 760 ntBASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 MPDU1-223ENST00000582151 728 ntBASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 PCDHA1-201ENST00000378133 2726 ntBASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRTM1Q9HBL6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 PTCHD3P3-201ENST00000403073 906 ntBASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 TSPY19P-201ENST00000418461 509 ntBASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 TSPY18P-201ENST00000441642 509 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms