Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC012640.2-201ENST00000561606 901 ntBASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 SLC22A20-204ENST00000530038 1673 ntBASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 PMS2P1-201ENST00000431037 1228 ntBASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 AL031008.1-201ENST00000619963 541 ntBASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 AC148477.8-201ENST00000624298 468 ntBASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 AP001350.2-201ENST00000625104 1094 ntBASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 FAM215A-202ENST00000632077 792 ntBASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC40Q9H9A6 KRT8P39-201ENST00000396270 1433 ntBASIC17.02■□□□□ 0.31
LRRC40Q9H9A6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC40Q9H9A6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC40Q9H9A6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC40Q9H9A6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC40Q9H9A6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC40Q9H9A6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 MRPL20P1-201ENST00000400819 433 ntBASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 CYP2A7P1-201ENST00000595391 815 ntBASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 AL773604.1-201ENST00000617417 272 ntBASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 AL662844.4-201ENST00000606367 2838 ntBASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC40Q9H9A6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 PC-214ENST00000628663 1470 ntTSL 5 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC40Q9H9A6 ALOX12P2-203ENST00000570921 1945 ntBASIC17■□□□□ 0.31
LRRC40Q9H9A6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LRRC40Q9H9A6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms