Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 GPX1P2-201ENST00000429271 606 ntBASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 HTR5BP-201ENST00000430851 1154 ntBASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 AC092919.2-201ENST00000623631 1645 ntBASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 AKAP8P1-201ENST00000434743 1349 ntBASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM62Q9BVG3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 WASH6P-202ENST00000359512 1437 ntBASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 AC078925.2-201ENST00000624013 1973 ntBASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 KRT18P34-201ENST00000488218 1270 ntBASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 RARRES2P8-201ENST00000566335 367 ntBASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM62Q9BVG3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM62Q9BVG3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM62Q9BVG3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM62Q9BVG3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM62Q9BVG3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM62Q9BVG3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM62Q9BVG3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM62Q9BVG3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM62Q9BVG3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM62Q9BVG3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRIM62Q9BVG3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM62Q9BVG3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms