Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 BX088651.1-201ENST00000540551 451 ntBASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 AC024563.2-201ENST00000603282 481 ntBASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 AC019129.2-201ENST00000609837 1235 ntBASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 AC004263.2-201ENST00000617183 678 ntBASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 AC092338.2-201ENST00000568827 1415 ntBASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SEC22CQ9BRL7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.21□□□□□ -0.14
SEC22CQ9BRL7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SEC22CQ9BRL7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SEC22CQ9BRL7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SEC22CQ9BRL7 AC010460.3-201ENST00000511359 1579 ntBASIC14.21□□□□□ -0.14
SEC22CQ9BRL7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SEC22CQ9BRL7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.21□□□□□ -0.14
SEC22CQ9BRL7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SEC22CQ9BRL7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.21□□□□□ -0.14
SEC22CQ9BRL7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.14
SEC22CQ9BRL7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SEC22CQ9BRL7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SEC22CQ9BRL7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 COX5BP2-201ENST00000392354 334 ntBASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 GGT4P-201ENST00000623672 1708 ntBASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms