Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK1Q99986 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.89□□□□□ -0.03
VRK1Q99986 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK1Q99986 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.89□□□□□ -0.03
VRK1Q99986 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK1Q99986 PRYP5-201ENST00000451909 266 ntBASIC14.89□□□□□ -0.03
VRK1Q99986 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.89□□□□□ -0.03
VRK1Q99986 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK1Q99986 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.89□□□□□ -0.03
VRK1Q99986 AL356488.2-201ENST00000602755 427 ntBASIC14.89□□□□□ -0.03
VRK1Q99986 Z83851.2-201ENST00000609564 659 ntBASIC14.89□□□□□ -0.03
VRK1Q99986 AC073592.4-201ENST00000623827 446 ntBASIC14.89□□□□□ -0.03
VRK1Q99986 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK1Q99986 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK1Q99986 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK1Q99986 TSPY26P-202ENST00000565928 3884 ntBASIC14.89□□□□□ -0.03
VRK1Q99986 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
VRK1Q99986 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK1Q99986 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK1Q99986 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
VRK1Q99986 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK1Q99986 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK1Q99986 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
VRK1Q99986 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
VRK1Q99986 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VRK1Q99986 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 KRT18P13-201ENST00000400056 1290 ntBASIC14.88□□□□□ -0.03
VRK1Q99986 MED15P5-201ENST00000423150 992 ntBASIC14.88□□□□□ -0.03
VRK1Q99986 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.88□□□□□ -0.03
VRK1Q99986 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
VRK1Q99986 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.88□□□□□ -0.03
VRK1Q99986 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.88□□□□□ -0.03
VRK1Q99986 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.88□□□□□ -0.03
VRK1Q99986 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 AC027601.4-201ENST00000611259 610 ntBASIC14.88□□□□□ -0.03
VRK1Q99986 GPALPP1-207ENST00000611650 899 ntBASIC14.88□□□□□ -0.03
VRK1Q99986 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK1Q99986 AC068587.6-202ENST00000641839 5619 ntBASIC14.88□□□□□ -0.03
VRK1Q99986 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
VRK1Q99986 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.87□□□□□ -0.03
VRK1Q99986 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VRK1Q99986 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VRK1Q99986 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VRK1Q99986 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
VRK1Q99986 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VRK1Q99986 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms