Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCC1Q96S66 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.21□□□□□ -0.13
CLCC1Q96S66 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLCC1Q96S66 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCC1Q96S66 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCC1Q96S66 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLCC1Q96S66 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLCC1Q96S66 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCC1Q96S66 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLCC1Q96S66 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCC1Q96S66 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCC1Q96S66 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLCC1Q96S66 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCC1Q96S66 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.21□□□□□ -0.14
CLCC1Q96S66 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.21□□□□□ -0.14
CLCC1Q96S66 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CLCC1Q96S66 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CLCC1Q96S66 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCC1Q96S66 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCC1Q96S66 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 AC006449.5-201ENST00000610658 2098 ntBASIC14.2□□□□□ -0.14
CLCC1Q96S66 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 BX276092.5-203ENST00000456199 560 ntBASIC14.2□□□□□ -0.14
CLCC1Q96S66 FAM86EP-206ENST00000510506 987 ntBASIC14.2□□□□□ -0.14
CLCC1Q96S66 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCC1Q96S66 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLCC1Q96S66 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CLCC1Q96S66 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLCC1Q96S66 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
CLCC1Q96S66 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CLCC1Q96S66 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CLCC1Q96S66 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
CLCC1Q96S66 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.19□□□□□ -0.14
CLCC1Q96S66 PCED1CP-201ENST00000419887 785 ntBASIC14.19□□□□□ -0.14
CLCC1Q96S66 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
CLCC1Q96S66 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.19□□□□□ -0.14
CLCC1Q96S66 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLCC1Q96S66 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.19□□□□□ -0.14
CLCC1Q96S66 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.19□□□□□ -0.14
CLCC1Q96S66 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLCC1Q96S66 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms