Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 AC061975.2-201ENST00000581722 295 ntBASIC19.35■□□□□ 0.69
CDCA5Q96FF9 AC026979.3-201ENST00000607315 403 ntBASIC19.35■□□□□ 0.69
CDCA5Q96FF9 MIR8072-201ENST00000614241 80 ntBASIC19.35■□□□□ 0.69
CDCA5Q96FF9 MIR6069-201ENST00000620069 79 ntBASIC19.35■□□□□ 0.69
CDCA5Q96FF9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDCA5Q96FF9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 AC006277.1-201ENST00000624348 1610 ntBASIC19.34■□□□□ 0.69
CDCA5Q96FF9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 RRP7BP-205ENST00000566851 833 ntBASIC19.34■□□□□ 0.69
CDCA5Q96FF9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CDCA5Q96FF9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDCA5Q96FF9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDCA5Q96FF9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.33■□□□□ 0.69
CDCA5Q96FF9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDCA5Q96FF9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.33■□□□□ 0.69
CDCA5Q96FF9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CDCA5Q96FF9 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDCA5Q96FF9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.33■□□□□ 0.68
CDCA5Q96FF9 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDCA5Q96FF9 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.33■□□□□ 0.68
CDCA5Q96FF9 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.33■□□□□ 0.68
CDCA5Q96FF9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.33■□□□□ 0.68
CDCA5Q96FF9 AC092337.1-201ENST00000568699 1129 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms