Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
VPS33AQ96AX1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 AC006538.1-201ENST00000567905 1585 ntBASIC16.17■□□□□ 0.18
VPS33AQ96AX1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 RCN1P2-201ENST00000398357 915 ntBASIC16.17■□□□□ 0.18
VPS33AQ96AX1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 AL031133.1-201ENST00000406807 723 ntBASIC16.17■□□□□ 0.18
VPS33AQ96AX1 AL020989.1-201ENST00000422979 469 ntBASIC16.17■□□□□ 0.18
VPS33AQ96AX1 TMPOP1-202ENST00000424642 1267 ntBASIC16.17■□□□□ 0.18
VPS33AQ96AX1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 MINOS1P3-201ENST00000457048 203 ntBASIC16.17■□□□□ 0.18
VPS33AQ96AX1 AC096582.2-201ENST00000510860 516 ntBASIC16.17■□□□□ 0.18
VPS33AQ96AX1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 BNIP3P18-201ENST00000593976 575 ntBASIC16.17■□□□□ 0.18
VPS33AQ96AX1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 KRT18P1-202ENST00000452408 1331 ntBASIC16.17■□□□□ 0.18
VPS33AQ96AX1 AC005332.1-201ENST00000577698 1310 ntBASIC16.17■□□□□ 0.18
VPS33AQ96AX1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS33AQ96AX1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 AL021920.2-201ENST00000624828 1351 ntBASIC16.16■□□□□ 0.18
VPS33AQ96AX1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms