Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.92□□□□□ -0.02
RFT1Q96AA3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFT1Q96AA3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.92□□□□□ -0.02
RFT1Q96AA3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFT1Q96AA3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.92□□□□□ -0.02
RFT1Q96AA3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RFT1Q96AA3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFT1Q96AA3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFT1Q96AA3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFT1Q96AA3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.92□□□□□ -0.02
RFT1Q96AA3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.92□□□□□ -0.02
RFT1Q96AA3 AC125634.1-201ENST00000438758 1403 ntBASIC14.92□□□□□ -0.02
RFT1Q96AA3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 MYCLP1-201ENST00000372451 1075 ntBASIC14.91□□□□□ -0.02
RFT1Q96AA3 AL845331.1-201ENST00000424978 1190 ntBASIC14.91□□□□□ -0.02
RFT1Q96AA3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 RN7SL606P-201ENST00000472779 293 ntBASIC14.91□□□□□ -0.02
RFT1Q96AA3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 LINC01238-205ENST00000567549 1107 ntBASIC14.91□□□□□ -0.02
RFT1Q96AA3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 AC011840.4-201ENST00000578471 627 ntBASIC14.91□□□□□ -0.02
RFT1Q96AA3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFT1Q96AA3 HLA-A-202ENST00000376806 1854 ntBASIC14.91□□□□□ -0.02
RFT1Q96AA3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.91□□□□□ -0.02
RFT1Q96AA3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 MTHFR-217ENST00000641820 1569 ntBASIC14.9□□□□□ -0.02
RFT1Q96AA3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 TMPOP1-202ENST00000424642 1267 ntBASIC14.9□□□□□ -0.02
RFT1Q96AA3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 AC011498.5-201ENST00000592027 486 ntBASIC14.9□□□□□ -0.02
RFT1Q96AA3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 AC099063.4-201ENST00000641099 1602 ntBASIC14.9□□□□□ -0.02
RFT1Q96AA3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.9□□□□□ -0.02
RFT1Q96AA3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFT1Q96AA3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
RFT1Q96AA3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFT1Q96AA3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms