Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
AP3S1Q92572 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
AP3S1Q92572 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.82□□□□□ -0.04
AP3S1Q92572 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
AP3S1Q92572 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 AC138969.2-201ENST00000532739 9932 ntBASIC14.82□□□□□ -0.04
AP3S1Q92572 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
AP3S1Q92572 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
AP3S1Q92572 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.82□□□□□ -0.04
AP3S1Q92572 UBE2SP1-201ENST00000450587 669 ntBASIC14.82□□□□□ -0.04
AP3S1Q92572 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 RPPH1-201ENST00000516869 333 ntBASIC14.82□□□□□ -0.04
AP3S1Q92572 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.82□□□□□ -0.04
AP3S1Q92572 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
AP3S1Q92572 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
AP3S1Q92572 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.82□□□□□ -0.04
AP3S1Q92572 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 AC013268.4-201ENST00000637413 2228 ntBASIC14.82□□□□□ -0.04
AP3S1Q92572 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.82□□□□□ -0.04
AP3S1Q92572 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
AP3S1Q92572 AL021920.2-201ENST00000624828 1351 ntBASIC14.82□□□□□ -0.04
AP3S1Q92572 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
AP3S1Q92572 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.82□□□□□ -0.04
AP3S1Q92572 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.82□□□□□ -0.04
AP3S1Q92572 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.82□□□□□ -0.04
AP3S1Q92572 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S1Q92572 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.81□□□□□ -0.04
AP3S1Q92572 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.81□□□□□ -0.04
AP3S1Q92572 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
AP3S1Q92572 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.81□□□□□ -0.04
AP3S1Q92572 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.81□□□□□ -0.04
AP3S1Q92572 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
AP3S1Q92572 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 AP000523.1-201ENST00000398242 1049 ntBASIC14.81□□□□□ -0.04
AP3S1Q92572 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
AP3S1Q92572 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
AP3S1Q92572 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.81□□□□□ -0.04
AP3S1Q92572 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.81□□□□□ -0.04
AP3S1Q92572 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
AP3S1Q92572 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.81□□□□□ -0.04
AP3S1Q92572 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
AP3S1Q92572 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
AP3S1Q92572 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.81□□□□□ -0.04
AP3S1Q92572 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.81□□□□□ -0.04
AP3S1Q92572 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.81□□□□□ -0.04
AP3S1Q92572 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
AP3S1Q92572 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
AP3S1Q92572 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.81□□□□□ -0.04
AP3S1Q92572 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.81□□□□□ -0.04
AP3S1Q92572 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
AP3S1Q92572 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S1Q92572 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
AP3S1Q92572 AL135999.2-201ENST00000622438 1686 ntBASIC14.81□□□□□ -0.04
AP3S1Q92572 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.81□□□□□ -0.04
AP3S1Q92572 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
AP3S1Q92572 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
AP3S1Q92572 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
AP3S1Q92572 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.8□□□□□ -0.04
AP3S1Q92572 AC023157.3-201ENST00000619086 2088 ntBASIC14.8□□□□□ -0.04
AP3S1Q92572 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S1Q92572 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms