Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 RPS2P55-201ENST00000397318 883 ntBASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 AC009336.1-201ENST00000608941 1553 ntBASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 NORAD-201ENST00000565493 5339 ntBASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 AC138035.3-201ENST00000622706 2791 ntBASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.18□□□□□ -0.3
MBD3L1Q8WWY6 AC126755.1-201ENST00000525846 6405 ntBASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 AC006277.1-201ENST00000624348 1610 ntBASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 KRT8P10-201ENST00000450021 1447 ntBASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 AC128676.1-201ENST00000454392 318 ntBASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 ECEL1P2-202ENST00000465689 757 ntBASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 AP003733.1-201ENST00000491725 852 ntBASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L1Q8WWY6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms