Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.13■□□□□ 0.81
SNED1Q8TER0 AC006277.1-201ENST00000624348 1610 ntBASIC20.13■□□□□ 0.81
SNED1Q8TER0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SNED1Q8TER0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.13■□□□□ 0.81
SNED1Q8TER0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 ANKRD19P-201ENST00000338192 862 ntBASIC20.12■□□□□ 0.81
SNED1Q8TER0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 AC093724.1-201ENST00000448659 1027 ntBASIC20.12■□□□□ 0.81
SNED1Q8TER0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 AL512343.1-201ENST00000605837 169 ntBASIC20.12■□□□□ 0.81
SNED1Q8TER0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 AC004461.2-201ENST00000629517 803 ntBASIC20.12■□□□□ 0.81
SNED1Q8TER0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 CROCCP2-202ENST00000412962 2773 ntBASIC20.12■□□□□ 0.81
SNED1Q8TER0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNED1Q8TER0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.12■□□□□ 0.81
SNED1Q8TER0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.12■□□□□ 0.81
SNED1Q8TER0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.11■□□□□ 0.81
SNED1Q8TER0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.11■□□□□ 0.81
SNED1Q8TER0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.11■□□□□ 0.81
SNED1Q8TER0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 AC011495.1-201ENST00000498085 584 ntBASIC20.11■□□□□ 0.81
SNED1Q8TER0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.11■□□□□ 0.81
SNED1Q8TER0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
SNED1Q8TER0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
SNED1Q8TER0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SNED1Q8TER0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNED1Q8TER0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.11■□□□□ 0.81
SNED1Q8TER0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
SNED1Q8TER0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNED1Q8TER0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNED1Q8TER0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNED1Q8TER0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 AC092337.1-201ENST00000568699 1129 ntBASIC20.1■□□□□ 0.81
SNED1Q8TER0 AL033527.5-202ENST00000641632 1098 ntBASIC20.1■□□□□ 0.81
SNED1Q8TER0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNED1Q8TER0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNED1Q8TER0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNED1Q8TER0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNED1Q8TER0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNED1Q8TER0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNED1Q8TER0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNED1Q8TER0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SNED1Q8TER0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms