Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 HCG4-201ENST00000418983 998 ntBASIC23.28■■□□□ 1.32
TMC1Q8TDI8 AC005237.2-201ENST00000434368 219 ntBASIC23.28■■□□□ 1.32
TMC1Q8TDI8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 AC109322.1-201ENST00000524499 1264 ntBASIC23.28■■□□□ 1.32
TMC1Q8TDI8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 AC243562.1-201ENST00000560672 389 ntBASIC23.28■■□□□ 1.32
TMC1Q8TDI8 RARRES2P8-201ENST00000566335 367 ntBASIC23.28■■□□□ 1.32
TMC1Q8TDI8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 MPDU1-223ENST00000582151 728 ntBASIC23.28■■□□□ 1.32
TMC1Q8TDI8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 AC106886.4-201ENST00000623557 2502 ntBASIC23.28■■□□□ 1.32
TMC1Q8TDI8 AC092068.3-201ENST00000587894 2016 ntBASIC23.28■■□□□ 1.32
TMC1Q8TDI8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMC1Q8TDI8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 AL592309.1-201ENST00000443127 649 ntBASIC23.27■■□□□ 1.32
TMC1Q8TDI8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 AC091167.2-201ENST00000579581 588 ntBASIC23.27■■□□□ 1.32
TMC1Q8TDI8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
TMC1Q8TDI8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC23.27■■□□□ 1.31
TMC1Q8TDI8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 AC131009.4-201ENST00000624048 1740 ntBASIC23.26■■□□□ 1.31
TMC1Q8TDI8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 AL627223.1-201ENST00000416693 442 ntBASIC23.26■■□□□ 1.31
TMC1Q8TDI8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TMC1Q8TDI8 AL021920.2-201ENST00000624828 1351 ntBASIC23.26■■□□□ 1.31
TMC1Q8TDI8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMC1Q8TDI8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMC1Q8TDI8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms