Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 PPP1R26P1-201ENST00000474415 3613 ntBASIC10.34□□□□□ -0.75
SVIPQ8NHG7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 PAX8-AS1-205ENST00000437551 2390 ntTSL 5 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 TTYH2-201ENST00000269346 3490 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 DLGAP4-213ENST00000489701 2396 ntTSL 2 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 POM121B-201ENST00000380760 2487 ntBASIC10.33□□□□□ -0.76
SVIPQ8NHG7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 RASAL1-204ENST00000546530 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 TRERF1-203ENST00000372917 3914 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 EPHB6-201ENST00000411471 3367 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 GPR61-207ENST00000618721 2823 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 AL022323.5-201ENST00000624101 2059 ntBASIC10.33□□□□□ -0.76
SVIPQ8NHG7 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 CPEB1-AS1-202ENST00000618020 2994 ntBASIC10.33□□□□□ -0.76
SVIPQ8NHG7 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 PDCD4-201ENST00000280154 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 ARHGAP40-202ENST00000373345 2841 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 TYRO3P-201ENST00000558165 2705 ntBASIC10.33□□□□□ -0.76
SVIPQ8NHG7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 ENO4-203ENST00000409522 1840 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SVIPQ8NHG7 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 NOL10-202ENST00000381685 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 GOLM1-202ENST00000388711 3022 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 DMBT1P1-203ENST00000636837 4628 ntBASIC10.32□□□□□ -0.76
SVIPQ8NHG7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC10.32□□□□□ -0.76
SVIPQ8NHG7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms