Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 OR7E47P-204ENST00000575924 449 ntBASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 AC008667.4-201ENST00000607370 168 ntBASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 AL136379.1-201ENST00000623471 2642 ntBASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 RPS2P28-201ENST00000314255 741 ntBASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 AC108073.2-201ENST00000464002 357 ntBASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 IGHV3-22-201ENST00000520721 359 ntBASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 IGHV3-65-201ENST00000523210 341 ntBASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 AL662844.1-201ENST00000546340 181 ntBASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 MIR1199-201ENST00000621445 119 ntBASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 AC004790.2-201ENST00000623588 572 ntBASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIMC1Q8NDZ2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SIMC1Q8NDZ2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SIMC1Q8NDZ2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIMC1Q8NDZ2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIMC1Q8NDZ2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIMC1Q8NDZ2 PCDHA14-201ENST00000506751 2298 ntBASIC15.83■□□□□ 0.13
SIMC1Q8NDZ2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SIMC1Q8NDZ2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.83■□□□□ 0.13
SIMC1Q8NDZ2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 UNC93B6-202ENST00000528242 690 ntBASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 REXO1L3P-201ENST00000622202 1288 ntBASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 OR6D1P-203ENST00000641209 4860 ntBASIC15.83■□□□□ 0.12
SIMC1Q8NDZ2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms