Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 PCDHA14-201ENST00000506751 2298 ntBASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 MTDHP5-201ENST00000598980 586 ntBASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 AC099522.2-201ENST00000607001 744 ntBASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 AC091812.2-201ENST00000619081 385 ntBASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC4A11Q8NBS3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 AC021097.1-201ENST00000607902 574 ntBASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 AC092902.6-201ENST00000641783 218 ntBASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC4A11Q8NBS3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SLC4A11Q8NBS3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC4A11Q8NBS3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SLC4A11Q8NBS3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC4A11Q8NBS3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.71■□□□□ 0.42
SLC4A11Q8NBS3 GGT3P-204ENST00000453783 1664 ntBASIC17.71■□□□□ 0.42
SLC4A11Q8NBS3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms