Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 RARRES2P8-201ENST00000566335 367 ntBASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 OR6D1P-203ENST00000641209 4860 ntBASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAM1L1Q8N609 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 MIR1233-2-201ENST00000408138 82 ntBASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 MIR1233-1-201ENST00000408722 82 ntBASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 AL355306.1-201ENST00000415580 579 ntBASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 AL671277.1-201ENST00000429656 993 ntBASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 CEND1P1-201ENST00000451006 455 ntBASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 FAM86C2P-203ENST00000528684 1004 ntBASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 MIR4469-201ENST00000583919 79 ntBASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAM1L1Q8N609 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAM1L1Q8N609 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAM1L1Q8N609 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TRAM1L1Q8N609 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TRAM1L1Q8N609 WASH6P-202ENST00000359512 1437 ntBASIC16.52■□□□□ 0.23
TRAM1L1Q8N609 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAM1L1Q8N609 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAM1L1Q8N609 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.52■□□□□ 0.23
TRAM1L1Q8N609 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms