Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.36■□□□□ 0.37
SCML4Q8N228 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCML4Q8N228 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.35■□□□□ 0.37
SCML4Q8N228 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML4Q8N228 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML4Q8N228 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SCML4Q8N228 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.35■□□□□ 0.37
SCML4Q8N228 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SCML4Q8N228 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.35■□□□□ 0.37
SCML4Q8N228 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML4Q8N228 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.35■□□□□ 0.37
SCML4Q8N228 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.35■□□□□ 0.37
SCML4Q8N228 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SCML4Q8N228 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.35■□□□□ 0.37
SCML4Q8N228 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.35■□□□□ 0.37
SCML4Q8N228 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.35■□□□□ 0.37
SCML4Q8N228 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.35■□□□□ 0.37
SCML4Q8N228 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML4Q8N228 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML4Q8N228 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML4Q8N228 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.35■□□□□ 0.37
SCML4Q8N228 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
SCML4Q8N228 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCML4Q8N228 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCML4Q8N228 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.35■□□□□ 0.37
SCML4Q8N228 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCML4Q8N228 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SCML4Q8N228 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML4Q8N228 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML4Q8N228 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML4Q8N228 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCML4Q8N228 MIR346-201ENST00000362234 95 ntBASIC17.34■□□□□ 0.37
SCML4Q8N228 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.34■□□□□ 0.37
SCML4Q8N228 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.34■□□□□ 0.37
SCML4Q8N228 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML4Q8N228 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.34■□□□□ 0.37
SCML4Q8N228 AC004461.1-201ENST00000412461 403 ntBASIC17.34■□□□□ 0.37
SCML4Q8N228 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SCML4Q8N228 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML4Q8N228 SPCS2P4-201ENST00000436160 681 ntBASIC17.34■□□□□ 0.37
SCML4Q8N228 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.34■□□□□ 0.37
SCML4Q8N228 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML4Q8N228 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCML4Q8N228 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.34■□□□□ 0.37
SCML4Q8N228 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.34■□□□□ 0.37
SCML4Q8N228 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.34■□□□□ 0.37
SCML4Q8N228 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCML4Q8N228 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.34■□□□□ 0.37
SCML4Q8N228 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.34■□□□□ 0.37
SCML4Q8N228 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.34■□□□□ 0.37
SCML4Q8N228 AL691403.2-201ENST00000618460 490 ntBASIC17.34■□□□□ 0.37
SCML4Q8N228 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCML4Q8N228 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.34■□□□□ 0.37
SCML4Q8N228 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.34■□□□□ 0.37
SCML4Q8N228 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCML4Q8N228 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML4Q8N228 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCML4Q8N228 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCML4Q8N228 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML4Q8N228 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCML4Q8N228 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCML4Q8N228 LINC01144-201ENST00000626198 1710 ntBASIC17.33■□□□□ 0.37
SCML4Q8N228 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SCML4Q8N228 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SCML4Q8N228 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SCML4Q8N228 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.33■□□□□ 0.37
SCML4Q8N228 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML4Q8N228 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML4Q8N228 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCML4Q8N228 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML4Q8N228 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
SCML4Q8N228 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.33■□□□□ 0.36
SCML4Q8N228 DNAJB3-202ENST00000449667 1266 ntBASIC17.33■□□□□ 0.36
SCML4Q8N228 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.33■□□□□ 0.36
SCML4Q8N228 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML4Q8N228 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCML4Q8N228 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML4Q8N228 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.33■□□□□ 0.36
SCML4Q8N228 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML4Q8N228 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.33■□□□□ 0.36
SCML4Q8N228 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.33■□□□□ 0.36
SCML4Q8N228 AP001160.2-201ENST00000596071 487 ntBASIC17.33■□□□□ 0.36
SCML4Q8N228 AC004835.2-201ENST00000603762 682 ntBASIC17.33■□□□□ 0.36
SCML4Q8N228 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SCML4Q8N228 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML4Q8N228 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms