Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 AL136982.4-201ENST00000437689 1740 ntBASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL27A1Q8IZC6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 HIST3H2BA-201ENST00000436555 524 ntBASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 RRP7BP-205ENST00000566851 833 ntBASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 LINC01115-203ENST00000606068 577 ntBASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 MIR658-201ENST00000385210 100 ntBASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL27A1Q8IZC6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms