Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TMEFF1Q8IYR6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.58■□□□□ 0.25
TMEFF1Q8IYR6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEFF1Q8IYR6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 AC021097.1-201ENST00000607902 574 ntBASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 AC093525.9-201ENST00000624961 1746 ntBASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TMEFF1Q8IYR6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 SPTLC1P1-201ENST00000447199 261 ntBASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 AL359881.2-201ENST00000602973 570 ntBASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 PP12613-201ENST00000424958 2230 ntBASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEFF1Q8IYR6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 KRT17P7-201ENST00000451704 1104 ntBASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TMEFF1Q8IYR6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 KRT8P49-201ENST00000604166 1432 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms