Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.08■□□□□ 0.8
SLX4Q8IY92 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.08■□□□□ 0.8
SLX4Q8IY92 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLX4Q8IY92 AC092053.1-201ENST00000605787 1936 ntBASIC20.08■□□□□ 0.8
SLX4Q8IY92 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLX4Q8IY92 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLX4Q8IY92 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SLX4Q8IY92 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SLX4Q8IY92 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.07■□□□□ 0.8
SLX4Q8IY92 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLX4Q8IY92 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SLX4Q8IY92 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SLX4Q8IY92 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLX4Q8IY92 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLX4Q8IY92 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.07■□□□□ 0.8
SLX4Q8IY92 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.07■□□□□ 0.8
SLX4Q8IY92 BCYRN1-201ENST00000418539 200 ntBASIC20.07■□□□□ 0.8
SLX4Q8IY92 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLX4Q8IY92 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SLX4Q8IY92 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLX4Q8IY92 LINC02012-201ENST00000608206 1725 ntBASIC20.07■□□□□ 0.8
SLX4Q8IY92 PDIA3P1-201ENST00000471856 1510 ntBASIC20.07■□□□□ 0.8
SLX4Q8IY92 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLX4Q8IY92 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.07■□□□□ 0.8
SLX4Q8IY92 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLX4Q8IY92 CDC14C-201ENST00000428251 1719 ntBASIC20.07■□□□□ 0.8
SLX4Q8IY92 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLX4Q8IY92 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 MEP1AP4-201ENST00000423244 1087 ntBASIC20.06■□□□□ 0.8
SLX4Q8IY92 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 GPR182-203ENST00000622922 591 ntBASIC20.06■□□□□ 0.8
SLX4Q8IY92 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 AC025048.3-201ENST00000590609 569 ntBASIC20.06■□□□□ 0.8
SLX4Q8IY92 AC005702.4-201ENST00000618393 416 ntBASIC20.06■□□□□ 0.8
SLX4Q8IY92 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SLX4Q8IY92 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLX4Q8IY92 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.05■□□□□ 0.8
SLX4Q8IY92 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SLX4Q8IY92 AC120498.9-201ENST00000339021 3867 ntBASIC20.05■□□□□ 0.8
SLX4Q8IY92 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLX4Q8IY92 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLX4Q8IY92 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SLX4Q8IY92 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLX4Q8IY92 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SLX4Q8IY92 MIR1908-201ENST00000410394 80 ntBASIC20.05■□□□□ 0.8
SLX4Q8IY92 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLX4Q8IY92 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.05■□□□□ 0.8
SLX4Q8IY92 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLX4Q8IY92 MIR6069-201ENST00000620069 79 ntBASIC20.05■□□□□ 0.8
SLX4Q8IY92 AL033527.5-201ENST00000641382 801 ntBASIC20.05■□□□□ 0.8
SLX4Q8IY92 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.05■□□□□ 0.8
SLX4Q8IY92 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLX4Q8IY92 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLX4Q8IY92 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLX4Q8IY92 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.05■□□□□ 0.8
SLX4Q8IY92 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLX4Q8IY92 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SLX4Q8IY92 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.05■□□□□ 0.8
SLX4Q8IY92 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLX4Q8IY92 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLX4Q8IY92 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.04■□□□□ 0.8
SLX4Q8IY92 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.04■□□□□ 0.8
SLX4Q8IY92 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLX4Q8IY92 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLX4Q8IY92 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLX4Q8IY92 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLX4Q8IY92 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLX4Q8IY92 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLX4Q8IY92 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms