Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 AL139011.1-202ENST00000642063 584 ntBASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 AL512652.2-201ENST00000625156 1716 ntBASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 AL603756.1-201ENST00000606511 2163 ntBASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC60Q8IWA6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 AC142381.1-201ENST00000426099 345 ntBASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 AC093512.1-201ENST00000617969 520 ntBASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 AP001059.3-201ENST00000619053 235 ntBASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC60Q8IWA6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 AL512356.2-201ENST00000546955 174 ntBASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 AC026150.2-201ENST00000564693 1156 ntBASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 AC015911.4-201ENST00000588022 1070 ntBASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 RNF216P1-203ENST00000404404 2427 ntBASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC60Q8IWA6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms