Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 AL513523.2-202ENST00000427283 2040 ntBASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 CYP2A7P1-201ENST00000595391 815 ntBASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 AF228730.7-201ENST00000641842 219 ntBASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CPNE8Q86YQ8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 AC073648.2-201ENST00000510116 352 ntBASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 AC136632.2-201ENST00000512891 861 ntBASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 AL121912.1-201ENST00000603683 238 ntBASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 AL031008.1-201ENST00000619963 541 ntBASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 AC008735.5-201ENST00000623544 497 ntBASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 KRT8P39-201ENST00000396270 1433 ntBASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE8Q86YQ8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE8Q86YQ8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms