Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PACS2Q86VP3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.95■□□□□ 0.3
PACS2Q86VP3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 AP000593.1-201ENST00000393668 712 ntBASIC16.94■□□□□ 0.3
PACS2Q86VP3 AL671277.2-201ENST00000458060 996 ntBASIC16.94■□□□□ 0.3
PACS2Q86VP3 RASA4DP-201ENST00000460726 1199 ntBASIC16.94■□□□□ 0.3
PACS2Q86VP3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.94■□□□□ 0.3
PACS2Q86VP3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PACS2Q86VP3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.94■□□□□ 0.3
PACS2Q86VP3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.93■□□□□ 0.3
PACS2Q86VP3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.93■□□□□ 0.3
PACS2Q86VP3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.93■□□□□ 0.3
PACS2Q86VP3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PACS2Q86VP3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 AC112907.2-201ENST00000448639 330 ntBASIC16.93■□□□□ 0.3
PACS2Q86VP3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.93■□□□□ 0.3
PACS2Q86VP3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.93■□□□□ 0.3
PACS2Q86VP3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 MIR3917-201ENST00000580971 93 ntBASIC16.93■□□□□ 0.3
PACS2Q86VP3 MIR3180-4-201ENST00000582223 153 ntBASIC16.93■□□□□ 0.3
PACS2Q86VP3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.93■□□□□ 0.3
PACS2Q86VP3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.93■□□□□ 0.3
PACS2Q86VP3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.93■□□□□ 0.3
PACS2Q86VP3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.93■□□□□ 0.3
PACS2Q86VP3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PACS2Q86VP3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PACS2Q86VP3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms