Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AP001350.2-201ENST00000625104 1094 ntBASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 AC006277.1-201ENST00000624348 1610 ntBASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNE3Q6ZMZ3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 PCDHA14-201ENST00000506751 2298 ntBASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 AC131009.4-201ENST00000624048 1740 ntBASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 AL118508.1-201ENST00000613502 2345 ntBASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNE3Q6ZMZ3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 RNF216P1-203ENST00000404404 2427 ntBASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 AC034105.1-201ENST00000563488 319 ntBASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNE3Q6ZMZ3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNE3Q6ZMZ3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNE3Q6ZMZ3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
SYNE3Q6ZMZ3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNE3Q6ZMZ3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.72■□□□□ 0.75
SYNE3Q6ZMZ3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms