Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 AC022188.1-201ENST00000620960 1664 ntBASIC15.3■□□□□ 0.04
NIPAL3Q6P499 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NIPAL3Q6P499 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 KRT18P67-201ENST00000432816 1264 ntBASIC15.29■□□□□ 0.04
NIPAL3Q6P499 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 AL160237.2-201ENST00000556165 472 ntBASIC15.29■□□□□ 0.04
NIPAL3Q6P499 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 AL121894.2-201ENST00000602977 491 ntBASIC15.29■□□□□ 0.04
NIPAL3Q6P499 AL353135.1-201ENST00000606729 504 ntBASIC15.29■□□□□ 0.04
NIPAL3Q6P499 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NIPAL3Q6P499 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms