Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRK2Q5S007 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.34□□□□□ -0.11
LRRK2Q5S007 RPL17P11-201ENST00000417593 544 ntBASIC14.34□□□□□ -0.11
LRRK2Q5S007 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 AC104306.2-201ENST00000451877 341 ntBASIC14.34□□□□□ -0.11
LRRK2Q5S007 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRK2Q5S007 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
LRRK2Q5S007 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.34□□□□□ -0.11
LRRK2Q5S007 TIMM17BP1-201ENST00000545713 516 ntBASIC14.34□□□□□ -0.11
LRRK2Q5S007 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.34□□□□□ -0.11
LRRK2Q5S007 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRK2Q5S007 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.34□□□□□ -0.11
LRRK2Q5S007 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.34□□□□□ -0.11
LRRK2Q5S007 MIR7845-201ENST00000618396 99 ntBASIC14.34□□□□□ -0.11
LRRK2Q5S007 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRK2Q5S007 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRK2Q5S007 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRK2Q5S007 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
LRRK2Q5S007 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRK2Q5S007 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LRRK2Q5S007 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRK2Q5S007 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 KRT8P37-201ENST00000451609 1420 ntBASIC14.33□□□□□ -0.12
LRRK2Q5S007 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.33□□□□□ -0.12
LRRK2Q5S007 AC091046.1-201ENST00000331871 207 ntBASIC14.33□□□□□ -0.12
LRRK2Q5S007 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 FTLP1-201ENST00000449155 526 ntBASIC14.33□□□□□ -0.12
LRRK2Q5S007 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 MIR5572-201ENST00000583188 137 ntBASIC14.33□□□□□ -0.12
LRRK2Q5S007 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 AC004461.2-201ENST00000629517 803 ntBASIC14.33□□□□□ -0.12
LRRK2Q5S007 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LRRK2Q5S007 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.33□□□□□ -0.12
LRRK2Q5S007 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRK2Q5S007 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms