Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.07■□□□□ 0
CCDC58Q4VC31 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.07■□□□□ 0
CCDC58Q4VC31 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
CCDC58Q4VC31 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CCDC58Q4VC31 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CCDC58Q4VC31 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.06■□□□□ 0
CCDC58Q4VC31 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.06■□□□□ 0
CCDC58Q4VC31 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.06■□□□□ 0
CCDC58Q4VC31 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.06■□□□□ 0
CCDC58Q4VC31 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CCDC58Q4VC31 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.06■□□□□ 0
CCDC58Q4VC31 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.06■□□□□ 0
CCDC58Q4VC31 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.06■□□□□ 0
CCDC58Q4VC31 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.06■□□□□ 0
CCDC58Q4VC31 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.06■□□□□ 0
CCDC58Q4VC31 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.06■□□□□ 0
CCDC58Q4VC31 HLA-J-202ENST00000469281 1241 ntBASIC15.06■□□□□ 0
CCDC58Q4VC31 RN7SL606P-201ENST00000472779 293 ntBASIC15.06■□□□□ 0
CCDC58Q4VC31 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.06■□□□□ 0
CCDC58Q4VC31 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CCDC58Q4VC31 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CCDC58Q4VC31 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.06■□□□□ 0
CCDC58Q4VC31 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.06■□□□□ 0
CCDC58Q4VC31 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.06■□□□□ 0
CCDC58Q4VC31 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.06■□□□□ 0
CCDC58Q4VC31 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 MTHFR-217ENST00000641820 1569 ntBASIC15.06■□□□□ 0
CCDC58Q4VC31 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.06■□□□□ 0
CCDC58Q4VC31 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.06■□□□□ 0
CCDC58Q4VC31 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.06■□□□□ 0
CCDC58Q4VC31 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC58Q4VC31 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CCDC58Q4VC31 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.05■□□□□ 0
CCDC58Q4VC31 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.05■□□□□ 0
CCDC58Q4VC31 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC58Q4VC31 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC58Q4VC31 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.05■□□□□ 0
CCDC58Q4VC31 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC58Q4VC31 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CCDC58Q4VC31 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC58Q4VC31 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CCDC58Q4VC31 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.05■□□□□ -0
CCDC58Q4VC31 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.05■□□□□ -0
CCDC58Q4VC31 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.05■□□□□ -0
CCDC58Q4VC31 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.05■□□□□ -0
CCDC58Q4VC31 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.05■□□□□ -0
CCDC58Q4VC31 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.05■□□□□ -0
CCDC58Q4VC31 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.05■□□□□ -0
CCDC58Q4VC31 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.05■□□□□ -0
CCDC58Q4VC31 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.05■□□□□ -0
CCDC58Q4VC31 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.05■□□□□ -0
CCDC58Q4VC31 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CCDC58Q4VC31 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.05■□□□□ -0
CCDC58Q4VC31 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.05■□□□□ -0
CCDC58Q4VC31 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CCDC58Q4VC31 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC58Q4VC31 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms