Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.14■□□□□ 0.5
TRIM71Q2Q1W2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.14■□□□□ 0.5
TRIM71Q2Q1W2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 API5-211ENST00000534695 560 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 TP53TG3HP-202ENST00000569755 579 ntBASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 KRT8P39-201ENST00000396270 1433 ntBASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM71Q2Q1W2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 AL079307.3-201ENST00000556114 283 ntBASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRIM71Q2Q1W2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 OR8S1-201ENST00000310194 1080 ntBASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM71Q2Q1W2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms