Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RSPO4Q2I0M5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 FOXO1B-201ENST00000504678 1527 ntBASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 AC007551.1-201ENST00000457394 519 ntBASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 AC079328.1-201ENST00000560358 952 ntBASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 AC005332.8-201ENST00000622750 2735 ntBASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO4Q2I0M5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 USP32P1-208ENST00000506594 1164 ntBASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 AC233724.13-201ENST00000598383 410 ntBASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 AL021578.1-201ENST00000613646 709 ntBASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 AP001350.2-201ENST00000625104 1094 ntBASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.1■□□□□ 0.17
RSPO4Q2I0M5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 AC135050.7-201ENST00000624508 2218 ntBASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 FAM220BP-201ENST00000377689 816 ntBASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 MPRIPP1-201ENST00000452433 1089 ntBASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 IGHJ2P-201ENST00000454480 60 ntBASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 PRYP6-201ENST00000514804 343 ntBASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 MIR8072-201ENST00000614241 80 ntBASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 AC004461.2-201ENST00000629517 803 ntBASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RSPO4Q2I0M5 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms