Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 AC097493.3-201ENST00000509725 367 ntBASIC19.93■□□□□ 0.78
PDS5AQ29RF7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 LINC02084-201ENST00000606069 1096 ntBASIC19.93■□□□□ 0.78
PDS5AQ29RF7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 AC105020.1-201ENST00000435356 2205 ntBASIC19.93■□□□□ 0.78
PDS5AQ29RF7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.92■□□□□ 0.78
PDS5AQ29RF7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 HLA-V-204ENST00000476601 1289 ntBASIC19.92■□□□□ 0.78
PDS5AQ29RF7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 BANF1P1-201ENST00000553684 263 ntBASIC19.92■□□□□ 0.78
PDS5AQ29RF7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PDS5AQ29RF7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 AL353705.2-201ENST00000428243 662 ntBASIC19.91■□□□□ 0.78
PDS5AQ29RF7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDS5AQ29RF7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms