Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.27■□□□□ 0.36
SCAPQ12770 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAPQ12770 HLA-J-203ENST00000494367 1087 ntBASIC17.27■□□□□ 0.36
SCAPQ12770 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.27■□□□□ 0.36
SCAPQ12770 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.27■□□□□ 0.36
SCAPQ12770 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.27■□□□□ 0.36
SCAPQ12770 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCAPQ12770 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SCAPQ12770 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.27■□□□□ 0.36
SCAPQ12770 AC011467.4-201ENST00000594891 528 ntBASIC17.27■□□□□ 0.36
SCAPQ12770 AL009183.1-201ENST00000603760 355 ntBASIC17.27■□□□□ 0.36
SCAPQ12770 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.27■□□□□ 0.36
SCAPQ12770 AC092865.6-201ENST00000642101 219 ntBASIC17.27■□□□□ 0.36
SCAPQ12770 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAPQ12770 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAPQ12770 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCAPQ12770 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SCAPQ12770 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCAPQ12770 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SCAPQ12770 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.27■□□□□ 0.35
SCAPQ12770 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCAPQ12770 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCAPQ12770 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
SCAPQ12770 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SCAPQ12770 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCAPQ12770 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCAPQ12770 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAPQ12770 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.26■□□□□ 0.35
SCAPQ12770 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.26■□□□□ 0.35
SCAPQ12770 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAPQ12770 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAPQ12770 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAPQ12770 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SCAPQ12770 GPAA1P2-202ENST00000606848 1787 ntBASIC17.26■□□□□ 0.35
SCAPQ12770 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCAPQ12770 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAPQ12770 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.26■□□□□ 0.35
SCAPQ12770 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCAPQ12770 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAPQ12770 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAPQ12770 MIR770-201ENST00000390219 98 ntBASIC17.26■□□□□ 0.35
SCAPQ12770 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.26■□□□□ 0.35
SCAPQ12770 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.26■□□□□ 0.35
SCAPQ12770 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.26■□□□□ 0.35
SCAPQ12770 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
SCAPQ12770 AC074386.1-202ENST00000463561 864 ntBASIC17.26■□□□□ 0.35
SCAPQ12770 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAPQ12770 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SCAPQ12770 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.26■□□□□ 0.35
SCAPQ12770 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.26■□□□□ 0.35
SCAPQ12770 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.26■□□□□ 0.35
SCAPQ12770 AC005829.1-201ENST00000570002 483 ntBASIC17.26■□□□□ 0.35
SCAPQ12770 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.26■□□□□ 0.35
SCAPQ12770 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAPQ12770 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAPQ12770 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAPQ12770 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCAPQ12770 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SCAPQ12770 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.26■□□□□ 0.35
SCAPQ12770 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.26■□□□□ 0.35
SCAPQ12770 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SCAPQ12770 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.26■□□□□ 0.35
SCAPQ12770 PCDHA14-201ENST00000506751 2298 ntBASIC17.26■□□□□ 0.35
SCAPQ12770 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SCAPQ12770 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.25■□□□□ 0.35
SCAPQ12770 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.25■□□□□ 0.35
SCAPQ12770 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.25■□□□□ 0.35
SCAPQ12770 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.25■□□□□ 0.35
SCAPQ12770 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.25■□□□□ 0.35
SCAPQ12770 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SCAPQ12770 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.25■□□□□ 0.35
SCAPQ12770 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.25■□□□□ 0.35
SCAPQ12770 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SCAPQ12770 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.25■□□□□ 0.35
SCAPQ12770 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.25■□□□□ 0.35
SCAPQ12770 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.25■□□□□ 0.35
SCAPQ12770 AC068137.2-201ENST00000605408 478 ntBASIC17.25■□□□□ 0.35
SCAPQ12770 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.25■□□□□ 0.35
SCAPQ12770 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SCAPQ12770 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.25■□□□□ 0.35
SCAPQ12770 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SCAPQ12770 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAPQ12770 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SCAPQ12770 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SCAPQ12770 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms