Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.19■□□□□ 0.18
HMGCS1Q01581 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGCS1Q01581 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCS1Q01581 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.19■□□□□ 0.18
HMGCS1Q01581 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGCS1Q01581 AC021087.4-201ENST00000563761 564 ntBASIC16.19■□□□□ 0.18
HMGCS1Q01581 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.19■□□□□ 0.18
HMGCS1Q01581 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.19■□□□□ 0.18
HMGCS1Q01581 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCS1Q01581 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.19■□□□□ 0.18
HMGCS1Q01581 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.19■□□□□ 0.18
HMGCS1Q01581 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCS1Q01581 PCDHA1-201ENST00000378133 2726 ntBASIC16.19■□□□□ 0.18
HMGCS1Q01581 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCS1Q01581 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGCS1Q01581 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGCS1Q01581 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.19■□□□□ 0.18
HMGCS1Q01581 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCS1Q01581 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HMGCS1Q01581 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCS1Q01581 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCS1Q01581 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HMGCS1Q01581 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCS1Q01581 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCS1Q01581 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.19■□□□□ 0.18
HMGCS1Q01581 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 AL671710.1-201ENST00000610245 2349 ntBASIC16.18■□□□□ 0.18
HMGCS1Q01581 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 AC002310.6-201ENST00000624451 1377 ntBASIC16.18■□□□□ 0.18
HMGCS1Q01581 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 SAPCD2P3-201ENST00000455031 850 ntBASIC16.18■□□□□ 0.18
HMGCS1Q01581 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 LINC01711-201ENST00000598340 967 ntBASIC16.18■□□□□ 0.18
HMGCS1Q01581 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 SNX33P1-201ENST00000592116 1762 ntBASIC16.18■□□□□ 0.18
HMGCS1Q01581 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCS1Q01581 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCS1Q01581 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 ME2P1-201ENST00000426028 1970 ntBASIC16.17■□□□□ 0.18
HMGCS1Q01581 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms