Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CDKL1Q00532 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDKL1Q00532 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CDKL1Q00532 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKL1Q00532 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKL1Q00532 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDKL1Q00532 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 AC022188.1-201ENST00000620960 1664 ntBASIC16.53■□□□□ 0.24
CDKL1Q00532 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDKL1Q00532 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKL1Q00532 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.53■□□□□ 0.24
CDKL1Q00532 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.53■□□□□ 0.24
CDKL1Q00532 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.53■□□□□ 0.24
CDKL1Q00532 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.53■□□□□ 0.24
CDKL1Q00532 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKL1Q00532 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKL1Q00532 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKL1Q00532 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.53■□□□□ 0.24
CDKL1Q00532 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.53■□□□□ 0.24
CDKL1Q00532 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKL1Q00532 AL139011.1-202ENST00000642063 584 ntBASIC16.53■□□□□ 0.24
CDKL1Q00532 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CDKL1Q00532 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDKL1Q00532 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKL1Q00532 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDKL1Q00532 PAUPAR-201ENST00000630360 2965 ntBASIC16.53■□□□□ 0.24
CDKL1Q00532 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL1Q00532 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL1Q00532 AL391256.1-201ENST00000443260 1855 ntBASIC16.52■□□□□ 0.24
CDKL1Q00532 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKL1Q00532 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.52■□□□□ 0.24
CDKL1Q00532 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL1Q00532 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.52■□□□□ 0.24
CDKL1Q00532 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.52■□□□□ 0.24
CDKL1Q00532 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL1Q00532 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKL1Q00532 AC105917.1-201ENST00000506637 2539 ntBASIC16.52■□□□□ 0.24
CDKL1Q00532 CYP2T1P-202ENST00000641596 2535 ntBASIC16.52■□□□□ 0.24
CDKL1Q00532 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL1Q00532 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL1Q00532 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL1Q00532 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKL1Q00532 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKL1Q00532 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL1Q00532 AC073621.1-201ENST00000392730 636 ntBASIC16.52■□□□□ 0.24
CDKL1Q00532 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.52■□□□□ 0.24
CDKL1Q00532 AC018712.1-201ENST00000455767 687 ntBASIC16.52■□□□□ 0.24
CDKL1Q00532 AC087163.2-201ENST00000457299 853 ntBASIC16.52■□□□□ 0.24
CDKL1Q00532 EMBP1-201ENST00000458200 901 ntBASIC16.52■□□□□ 0.24
CDKL1Q00532 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKL1Q00532 RNPS1P1-201ENST00000507437 918 ntBASIC16.52■□□□□ 0.24
CDKL1Q00532 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKL1Q00532 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CDKL1Q00532 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.52■□□□□ 0.24
CDKL1Q00532 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL1Q00532 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CDKL1Q00532 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL1Q00532 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL1Q00532 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL1Q00532 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL1Q00532 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL1Q00532 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL1Q00532 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL1Q00532 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.52■□□□□ 0.23
CDKL1Q00532 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL1Q00532 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CDKL1Q00532 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL1Q00532 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL1Q00532 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL1Q00532 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.52■□□□□ 0.23
CDKL1Q00532 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL1Q00532 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL1Q00532 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.52■□□□□ 0.23
CDKL1Q00532 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.52■□□□□ 0.23
CDKL1Q00532 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL1Q00532 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.52■□□□□ 0.23
CDKL1Q00532 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
CDKL1Q00532 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CDKL1Q00532 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.51■□□□□ 0.23
CDKL1Q00532 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms