Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 KRT89P-201ENST00000620027 1478 ntBASIC13.23□□□□□ -0.29
CCL20P78556 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CCL20P78556 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL20P78556 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CCL20P78556 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL20P78556 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL20P78556 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CCL20P78556 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL20P78556 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.23□□□□□ -0.29
CCL20P78556 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL20P78556 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL20P78556 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.23□□□□□ -0.29
CCL20P78556 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
CCL20P78556 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
CCL20P78556 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL20P78556 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CCL20P78556 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL20P78556 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CCL20P78556 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL20P78556 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL20P78556 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CCL20P78556 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL20P78556 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL20P78556 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL20P78556 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
CCL20P78556 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CCL20P78556 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.22□□□□□ -0.29
CCL20P78556 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.22□□□□□ -0.29
CCL20P78556 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CCL20P78556 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CCL20P78556 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CCL20P78556 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CCL20P78556 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 AC016027.1-202ENST00000607927 1699 ntBASIC13.22□□□□□ -0.29
CCL20P78556 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL20P78556 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CCL20P78556 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL20P78556 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL20P78556 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CCL20P78556 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.22□□□□□ -0.29
CCL20P78556 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
CCL20P78556 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL20P78556 RNA5SP413-201ENST00000516373 109 ntBASIC13.22□□□□□ -0.29
CCL20P78556 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.22□□□□□ -0.29
CCL20P78556 AC142086.2-201ENST00000569753 217 ntBASIC13.22□□□□□ -0.29
CCL20P78556 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.22□□□□□ -0.29
CCL20P78556 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.22□□□□□ -0.29
CCL20P78556 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 AL109923.1-201ENST00000618799 583 ntBASIC13.22□□□□□ -0.29
CCL20P78556 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CCL20P78556 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CCL20P78556 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.22□□□□□ -0.29
CCL20P78556 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.22□□□□□ -0.29
CCL20P78556 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.22□□□□□ -0.29
CCL20P78556 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL20P78556 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.22□□□□□ -0.29
CCL20P78556 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CCL20P78556 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CCL20P78556 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL20P78556 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL20P78556 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms