Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
RAE1P78406 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
RAE1P78406 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.89■□□□□ 0.13
RAE1P78406 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.89■□□□□ 0.13
RAE1P78406 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.89■□□□□ 0.13
RAE1P78406 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 PCDHA1-201ENST00000378133 2726 ntBASIC15.88■□□□□ 0.13
RAE1P78406 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAE1P78406 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.88■□□□□ 0.13
RAE1P78406 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.88■□□□□ 0.13
RAE1P78406 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAE1P78406 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAE1P78406 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RAE1P78406 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAE1P78406 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAE1P78406 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAE1P78406 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAE1P78406 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.88■□□□□ 0.13
RAE1P78406 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAE1P78406 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAE1P78406 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
RAE1P78406 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.88■□□□□ 0.13
RAE1P78406 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.88■□□□□ 0.13
RAE1P78406 AC098831.1-202ENST00000438821 336 ntBASIC15.88■□□□□ 0.13
RAE1P78406 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAE1P78406 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.88■□□□□ 0.13
RAE1P78406 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.88■□□□□ 0.13
RAE1P78406 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.88■□□□□ 0.13
RAE1P78406 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.88■□□□□ 0.13
RAE1P78406 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.88■□□□□ 0.13
RAE1P78406 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.88■□□□□ 0.13
RAE1P78406 AC010654.1-201ENST00000615722 808 ntBASIC15.88■□□□□ 0.13
RAE1P78406 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.88■□□□□ 0.13
RAE1P78406 AP001350.2-201ENST00000625104 1094 ntBASIC15.88■□□□□ 0.13
RAE1P78406 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAE1P78406 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
RAE1P78406 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RAE1P78406 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAE1P78406 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.88■□□□□ 0.13
RAE1P78406 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.88■□□□□ 0.13
RAE1P78406 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
RAE1P78406 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.88■□□□□ 0.13
RAE1P78406 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.88■□□□□ 0.13
RAE1P78406 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAE1P78406 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.87■□□□□ 0.13
RAE1P78406 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.87■□□□□ 0.13
RAE1P78406 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RAE1P78406 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RAE1P78406 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.87■□□□□ 0.13
RAE1P78406 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RAE1P78406 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RAE1P78406 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
RAE1P78406 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.87■□□□□ 0.13
RAE1P78406 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.87■□□□□ 0.13
RAE1P78406 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.87■□□□□ 0.13
RAE1P78406 AC108751.1-201ENST00000490852 363 ntBASIC15.87■□□□□ 0.13
RAE1P78406 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.87■□□□□ 0.13
RAE1P78406 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.87■□□□□ 0.13
RAE1P78406 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.87■□□□□ 0.13
RAE1P78406 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.87■□□□□ 0.13
RAE1P78406 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.87■□□□□ 0.13
RAE1P78406 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.87■□□□□ 0.13
RAE1P78406 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
RAE1P78406 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RAE1P78406 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RAE1P78406 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RAE1P78406 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.87■□□□□ 0.13
RAE1P78406 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
RAE1P78406 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
RAE1P78406 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAE1P78406 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAE1P78406 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.86■□□□□ 0.13
RAE1P78406 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.86■□□□□ 0.13
RAE1P78406 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.86■□□□□ 0.13
RAE1P78406 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAE1P78406 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAE1P78406 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAE1P78406 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAE1P78406 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms